Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
XRCC2O43543 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
XRCC2O43543 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
XRCC2O43543 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.55■□□□□ 0.88
XRCC2O43543 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
XRCC2O43543 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
XRCC2O43543 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
XRCC2O43543 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
XRCC2O43543 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XRCC2O43543 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XRCC2O43543 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XRCC2O43543 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
XRCC2O43543 RARRES2P2-201ENST00000394842 485 ntBASIC20.54■□□□□ 0.88
XRCC2O43543 HSD17B1P1-201ENST00000590052 955 ntBASIC20.54■□□□□ 0.88
XRCC2O43543 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.54■□□□□ 0.88
XRCC2O43543 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XRCC2O43543 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XRCC2O43543 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XRCC2O43543 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
XRCC2O43543 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
XRCC2O43543 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
XRCC2O43543 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
XRCC2O43543 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XRCC2O43543 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
XRCC2O43543 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
XRCC2O43543 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XRCC2O43543 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
XRCC2O43543 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
XRCC2O43543 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
XRCC2O43543 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
XRCC2O43543 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
XRCC2O43543 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.52■□□□□ 0.88
XRCC2O43543 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
XRCC2O43543 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
XRCC2O43543 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.52■□□□□ 0.88
XRCC2O43543 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
XRCC2O43543 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
XRCC2O43543 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.52■□□□□ 0.87
XRCC2O43543 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
XRCC2O43543 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.51■□□□□ 0.87
XRCC2O43543 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XRCC2O43543 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
XRCC2O43543 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.51■□□□□ 0.87
XRCC2O43543 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XRCC2O43543 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.51■□□□□ 0.87
XRCC2O43543 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
XRCC2O43543 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
XRCC2O43543 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XRCC2O43543 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.51■□□□□ 0.87
XRCC2O43543 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
XRCC2O43543 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.51■□□□□ 0.87
XRCC2O43543 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.51■□□□□ 0.87
XRCC2O43543 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
XRCC2O43543 SLC6A10P-202ENST00000431994 2058 ntBASIC20.5■□□□□ 0.87
XRCC2O43543 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRCC2O43543 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRCC2O43543 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
XRCC2O43543 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRCC2O43543 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.5■□□□□ 0.87
XRCC2O43543 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRCC2O43543 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRCC2O43543 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRCC2O43543 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
XRCC2O43543 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
XRCC2O43543 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRCC2O43543 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRCC2O43543 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
XRCC2O43543 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
XRCC2O43543 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRCC2O43543 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRCC2O43543 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
XRCC2O43543 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRCC2O43543 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
XRCC2O43543 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRCC2O43543 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
XRCC2O43543 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRCC2O43543 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.47■□□□□ 0.87
XRCC2O43543 AC138932.3-201ENST00000567634 1902 ntBASIC20.47■□□□□ 0.87
XRCC2O43543 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
XRCC2O43543 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
XRCC2O43543 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
XRCC2O43543 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRCC2O43543 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRCC2O43543 AP003733.4-201ENST00000623785 1697 ntBASIC20.46■□□□□ 0.87
XRCC2O43543 AL592293.1-201ENST00000502889 1188 ntBASIC20.46■□□□□ 0.87
XRCC2O43543 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
XRCC2O43543 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
XRCC2O43543 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRCC2O43543 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRCC2O43543 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRCC2O43543 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRCC2O43543 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
XRCC2O43543 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRCC2O43543 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRCC2O43543 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XRCC2O43543 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XRCC2O43543 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.45■□□□□ 0.86
XRCC2O43543 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRCC2O43543 AC018755.3-202ENST00000596210 929 ntBASIC20.45■□□□□ 0.86
XRCC2O43543 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms