Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 LONRF2P2-201ENST00000439212 571 ntBASIC21.37■■□□□ 1.01
TNFSF11O14788 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.37■■□□□ 1.01
TNFSF11O14788 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.36■■□□□ 1.01
TNFSF11O14788 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFSF11O14788 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFSF11O14788 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFSF11O14788 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.36■■□□□ 1.01
TNFSF11O14788 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.36■■□□□ 1.01
TNFSF11O14788 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.36■■□□□ 1.01
TNFSF11O14788 KRT8P33-201ENST00000508125 1423 ntBASIC21.36■■□□□ 1.01
TNFSF11O14788 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFSF11O14788 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFSF11O14788 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TNFSF11O14788 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFSF11O14788 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
TNFSF11O14788 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TNFSF11O14788 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFSF11O14788 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFSF11O14788 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.34■■□□□ 1.01
TNFSF11O14788 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.34■■□□□ 1.01
TNFSF11O14788 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.34■■□□□ 1.01
TNFSF11O14788 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFSF11O14788 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.34■■□□□ 1.01
TNFSF11O14788 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFSF11O14788 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TNFSF11O14788 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TNFSF11O14788 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFSF11O14788 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.33■■□□□ 1.01
TNFSF11O14788 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFSF11O14788 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.33■■□□□ 1.01
TNFSF11O14788 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TNFSF11O14788 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.33■■□□□ 1.01
TNFSF11O14788 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFSF11O14788 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TNFSF11O14788 AC019171.1-201ENST00000601251 1056 ntBASIC21.32■■□□□ 1
TNFSF11O14788 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFSF11O14788 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.32■■□□□ 1
TNFSF11O14788 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFSF11O14788 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFSF11O14788 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFSF11O14788 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNFSF11O14788 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFSF11O14788 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TNFSF11O14788 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TNFSF11O14788 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFSF11O14788 RARRES2P1-201ENST00000474487 481 ntBASIC21.3■■□□□ 1
TNFSF11O14788 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.3■■□□□ 1
TNFSF11O14788 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFSF11O14788 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFSF11O14788 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFSF11O14788 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFSF11O14788 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
TNFSF11O14788 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TNFSF11O14788 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFSF11O14788 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFSF11O14788 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TNFSF11O14788 YBX1P4-201ENST00000392794 808 ntBASIC21.29■■□□□ 1
TNFSF11O14788 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFSF11O14788 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.29■■□□□ 1
TNFSF11O14788 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TNFSF11O14788 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.28■■□□□ 1
TNFSF11O14788 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNFSF11O14788 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TNFSF11O14788 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFSF11O14788 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFSF11O14788 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFSF11O14788 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TNFSF11O14788 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TNFSF11O14788 AC103834.1-201ENST00000520383 144 ntBASIC21.27■■□□□ 1
TNFSF11O14788 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.27■■□□□ 1
TNFSF11O14788 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNFSF11O14788 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFSF11O14788 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
TNFSF11O14788 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF11O14788 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF11O14788 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFSF11O14788 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TNFSF11O14788 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.26■□□□□ 0.99
TNFSF11O14788 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFSF11O14788 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.26■□□□□ 0.99
TNFSF11O14788 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFSF11O14788 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 FOXO3B-201ENST00000395675 1928 ntBASIC21.25■□□□□ 0.99
TNFSF11O14788 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFSF11O14788 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.25■□□□□ 0.99
TNFSF11O14788 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFSF11O14788 MIR4508-201ENST00000584178 70 ntBASIC21.25■□□□□ 0.99
TNFSF11O14788 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFSF11O14788 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.24■□□□□ 0.99
TNFSF11O14788 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TNFSF11O14788 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF11O14788 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TNFSF11O14788 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFSF11O14788 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms