Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC026202.3-201ENST00000600805 1127 ntBASIC19.12■□□□□ 0.65
SRRM4A7MD48 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM4A7MD48 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM4A7MD48 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRRM4A7MD48 AL139125.2-201ENST00000623134 1869 ntBASIC19.11■□□□□ 0.65
SRRM4A7MD48 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SRRM4A7MD48 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SRRM4A7MD48 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM4A7MD48 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM4A7MD48 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM4A7MD48 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.11■□□□□ 0.65
SRRM4A7MD48 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.11■□□□□ 0.65
SRRM4A7MD48 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
SRRM4A7MD48 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM4A7MD48 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SRRM4A7MD48 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM4A7MD48 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRRM4A7MD48 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.11■□□□□ 0.65
SRRM4A7MD48 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM4A7MD48 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRRM4A7MD48 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM4A7MD48 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRRM4A7MD48 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SRRM4A7MD48 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SRRM4A7MD48 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SRRM4A7MD48 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SRRM4A7MD48 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRRM4A7MD48 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRRM4A7MD48 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRRM4A7MD48 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SRRM4A7MD48 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRRM4A7MD48 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
SRRM4A7MD48 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SRRM4A7MD48 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SRRM4A7MD48 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.08■□□□□ 0.64
SRRM4A7MD48 RNF126P1-201ENST00000567452 1320 ntBASIC19.07■□□□□ 0.64
SRRM4A7MD48 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRRM4A7MD48 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SRRM4A7MD48 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRRM4A7MD48 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.07■□□□□ 0.64
SRRM4A7MD48 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SRRM4A7MD48 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SRRM4A7MD48 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM4A7MD48 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.06■□□□□ 0.64
SRRM4A7MD48 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM4A7MD48 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM4A7MD48 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SRRM4A7MD48 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM4A7MD48 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SRRM4A7MD48 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM4A7MD48 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM4A7MD48 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.05■□□□□ 0.64
SRRM4A7MD48 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM4A7MD48 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM4A7MD48 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM4A7MD48 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.05■□□□□ 0.64
SRRM4A7MD48 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.05■□□□□ 0.64
SRRM4A7MD48 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM4A7MD48 AC009831.1-201ENST00000580420 1582 ntBASIC19.05■□□□□ 0.64
SRRM4A7MD48 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SRRM4A7MD48 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.04■□□□□ 0.64
SRRM4A7MD48 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 AP003733.4-201ENST00000623785 1697 ntBASIC19.04■□□□□ 0.64
SRRM4A7MD48 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SRRM4A7MD48 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
SRRM4A7MD48 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRRM4A7MD48 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRRM4A7MD48 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRRM4A7MD48 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRRM4A7MD48 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRRM4A7MD48 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SRRM4A7MD48 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SRRM4A7MD48 AC133552.2-201ENST00000619106 1032 ntBASIC19.03■□□□□ 0.64
SRRM4A7MD48 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SRRM4A7MD48 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SRRM4A7MD48 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRRM4A7MD48 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRRM4A7MD48 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRRM4A7MD48 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SRRM4A7MD48 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRRM4A7MD48 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRRM4A7MD48 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRRM4A7MD48 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRRM4A7MD48 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.01■□□□□ 0.63
SRRM4A7MD48 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.01■□□□□ 0.63
SRRM4A7MD48 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRRM4A7MD48 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRRM4A7MD48 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.01■□□□□ 0.63
SRRM4A7MD48 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRRM4A7MD48 HES4-204ENST00000484667 667 ntTSL 3 BASIC19■□□□□ 0.63
SRRM4A7MD48 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19■□□□□ 0.63
SRRM4A7MD48 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19■□□□□ 0.63
SRRM4A7MD48 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms