Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV4A0A0B4J268 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV4A0A0B4J268 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV4A0A0B4J268 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRAV4A0A0B4J268 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV4A0A0B4J268 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV4A0A0B4J268 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.02■□□□□ 0.32
TRAV4A0A0B4J268 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV4A0A0B4J268 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV4A0A0B4J268 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV4A0A0B4J268 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17■□□□□ 0.31
TRAV4A0A0B4J268 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV4A0A0B4J268 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV4A0A0B4J268 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV4A0A0B4J268 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17■□□□□ 0.31
TRAV4A0A0B4J268 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV4A0A0B4J268 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV4A0A0B4J268 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 AC022211.4-201ENST00000625094 2161 ntBASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV4A0A0B4J268 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV4A0A0B4J268 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV4A0A0B4J268 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 KRT18P10-201ENST00000388836 1287 ntBASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 RAP2CP1-202ENST00000605179 643 ntBASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV4A0A0B4J268 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 RNF126P1-201ENST00000567452 1320 ntBASIC16.95■□□□□ 0.3
TRAV4A0A0B4J268 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 AC026202.3-201ENST00000600805 1127 ntBASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV4A0A0B4J268 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV4A0A0B4J268 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV4A0A0B4J268 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV4A0A0B4J268 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TRAV4A0A0B4J268 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV4A0A0B4J268 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV4A0A0B4J268 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV4A0A0B4J268 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV4A0A0B4J268 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV4A0A0B4J268 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV4A0A0B4J268 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV4A0A0B4J268 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms