Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 CR559946.2-201ENST00000623684 991 ntBASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TRAV16A0A0A6YYK6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV16A0A0A6YYK6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV16A0A0A6YYK6 AC016575.1-201ENST00000607026 382 ntBASIC16.39■□□□□ 0.21
TRAV16A0A0A6YYK6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV16A0A0A6YYK6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV16A0A0A6YYK6 AP004609.3-201ENST00000610705 1884 ntBASIC16.39■□□□□ 0.21
TRAV16A0A0A6YYK6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV16A0A0A6YYK6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 WHAMMP3-201ENST00000611636 1609 ntBASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV16A0A0A6YYK6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV16A0A0A6YYK6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV16A0A0A6YYK6 AC138932.3-201ENST00000567634 1902 ntBASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 HLA-V-202ENST00000446817 847 ntBASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV16A0A0A6YYK6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 AC022211.4-201ENST00000625094 2161 ntBASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV16A0A0A6YYK6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV16A0A0A6YYK6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV16A0A0A6YYK6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV16A0A0A6YYK6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TRAV16A0A0A6YYK6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV16A0A0A6YYK6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV16A0A0A6YYK6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV16A0A0A6YYK6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV16A0A0A6YYK6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV16A0A0A6YYK6 AC148477.6-201ENST00000623746 465 ntBASIC16.32■□□□□ 0.2
TRAV16A0A0A6YYK6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV16A0A0A6YYK6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms