Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV8-1A0A0A6YYK1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV8-1A0A0A6YYK1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-1A0A0A6YYK1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-1A0A0A6YYK1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV8-1A0A0A6YYK1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-1A0A0A6YYK1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 HLA-V-202ENST00000446817 847 ntBASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-1A0A0A6YYK1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-1A0A0A6YYK1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.93■□□□□ 0.46
TRAV8-1A0A0A6YYK1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-1A0A0A6YYK1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV8-1A0A0A6YYK1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-1A0A0A6YYK1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-1A0A0A6YYK1 LINC00543-201ENST00000567234 1845 ntBASIC17.93■□□□□ 0.46
TRAV8-1A0A0A6YYK1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-1A0A0A6YYK1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-1A0A0A6YYK1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 DUX4L11-201ENST00000611504 1267 ntBASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 DUX4L12-201ENST00000614593 1267 ntBASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 DUX4L14-201ENST00000621227 1267 ntBASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV8-1A0A0A6YYK1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV8-1A0A0A6YYK1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-1A0A0A6YYK1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-1A0A0A6YYK1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-1A0A0A6YYK1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.89■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRAV8-1A0A0A6YYK1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV8-1A0A0A6YYK1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms