Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 AC022413.1-201ENST00000624602 984 ntBASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 AC138932.3-201ENST00000567634 1902 ntBASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV30A0A087WSZ9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV30A0A087WSZ9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV30A0A087WSZ9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV30A0A087WSZ9 RP9P-202ENST00000450133 1212 ntBASIC18.52■□□□□ 0.56
TRAV30A0A087WSZ9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV30A0A087WSZ9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV30A0A087WSZ9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV30A0A087WSZ9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV30A0A087WSZ9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV30A0A087WSZ9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV30A0A087WSZ9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV30A0A087WSZ9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV30A0A087WSZ9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRAV30A0A087WSZ9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 KRT18P10-201ENST00000388836 1287 ntBASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV30A0A087WSZ9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV30A0A087WSZ9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAV30A0A087WSZ9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV30A0A087WSZ9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV30A0A087WSZ9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV30A0A087WSZ9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV30A0A087WSZ9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAV30A0A087WSZ9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV30A0A087WSZ9 AC093323.1-202ENST00000635031 2045 ntBASIC18.48■□□□□ 0.55
TRAV30A0A087WSZ9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV30A0A087WSZ9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV30A0A087WSZ9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAV30A0A087WSZ9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAV30A0A087WSZ9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV30A0A087WSZ9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 SLC6A10P-202ENST00000431994 2058 ntBASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV30A0A087WSZ9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.46■□□□□ 0.54
TRAV30A0A087WSZ9 AL139125.2-201ENST00000623134 1869 ntBASIC18.46■□□□□ 0.54
TRAV30A0A087WSZ9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV30A0A087WSZ9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 AC093536.1-201ENST00000569153 554 ntBASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAV30A0A087WSZ9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV30A0A087WSZ9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV30A0A087WSZ9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV30A0A087WSZ9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV30A0A087WSZ9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV30A0A087WSZ9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms