Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.22■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.21■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.21■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.21■■□□□ 1.31
TRBV23OR9-2A0A075B6M9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.19■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.19■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.19■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.19■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.18■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.18■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 AC239859.2-201ENST00000444165 318 ntBASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 AC022616.5-201ENST00000518796 181 ntBASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 AC096887.2-201ENST00000623443 1957 ntBASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.16■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.16■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.15■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.14■■□□□ 1.3
TRBV23OR9-2A0A075B6M9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 AC092803.2-201ENST00000564287 1899 ntBASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 AC120024.1-201ENST00000562672 995 ntBASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 THA1P-201ENST00000590384 1145 ntBASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 AL592295.1-201ENST00000400984 884 ntBASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 KRT18P24-201ENST00000344739 1156 ntBASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 AC010501.1-201ENST00000606270 1962 ntBASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV23OR9-2A0A075B6M9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms