Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHB1Q9Y5F3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHB1Q9Y5F3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 POU5F1P6-201ENST00000466990 990 ntBASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AC006449.5-201ENST00000610658 2098 ntBASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB1Q9Y5F3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 AL355306.1-201ENST00000415580 579 ntBASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 KRT8P48-201ENST00000515599 1220 ntBASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 AC026120.1-201ENST00000611536 926 ntBASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms