Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB13Q9Y5F0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB13Q9Y5F0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 POU5F1P6-201ENST00000466990 990 ntBASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 KRT18P34-201ENST00000488218 1270 ntBASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 AL078644.1-201ENST00000609881 752 ntBASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB13Q9Y5F0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms