Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 DUX4L27-201ENST00000554796 1261 ntBASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 AC093512.1-201ENST00000617969 520 ntBASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 CETN4P-206ENST00000642099 2168 ntBASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 BNIP3P1-202ENST00000550043 1585 ntBASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 AC124067.4-201ENST00000519691 2379 ntBASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 AC097493.3-201ENST00000509725 367 ntBASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 AC005498.2-205ENST00000593218 784 ntBASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 AL603832.2-201ENST00000566195 2125 ntBASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPC1L1Q9UHC9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 AL844908.2-201ENST00000609461 460 ntBASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
NPC1L1Q9UHC9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPC1L1Q9UHC9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPC1L1Q9UHC9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NPC1L1Q9UHC9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.89■■□□□ 1.09
NPC1L1Q9UHC9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NPC1L1Q9UHC9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPC1L1Q9UHC9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 TREML5P-201ENST00000421694 576 ntBASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 AC055876.3-201ENST00000431496 288 ntBASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 AC138649.4-201ENST00000612222 287 ntBASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 AC106028.4-201ENST00000614509 607 ntBASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 AL513523.2-202ENST00000427283 2040 ntBASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 AC026691.1-201ENST00000602502 2017 ntBASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 IMPDH1P4-201ENST00000445028 1534 ntBASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPC1L1Q9UHC9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms