Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.1■□□□□ 0.01
LRFN1Q9P244 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 AC098859.1-201ENST00000502915 1238 ntBASIC15.1■□□□□ 0.01
LRFN1Q9P244 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 AL390754.1-201ENST00000619088 582 ntBASIC15.1■□□□□ 0.01
LRFN1Q9P244 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 FOXO1B-201ENST00000504678 1527 ntBASIC15.1■□□□□ 0.01
LRFN1Q9P244 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRFN1Q9P244 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRFN1Q9P244 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 AL512638.1-201ENST00000457493 794 ntBASIC15.09■□□□□ 0.01
LRFN1Q9P244 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 AC097493.3-201ENST00000509725 367 ntBASIC15.09■□□□□ 0.01
LRFN1Q9P244 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 MIR4745-201ENST00000577608 62 ntBASIC15.09■□□□□ 0.01
LRFN1Q9P244 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRFN1Q9P244 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRFN1Q9P244 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRFN1Q9P244 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
LRFN1Q9P244 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRFN1Q9P244 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.08■□□□□ 0.01
LRFN1Q9P244 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.08■□□□□ 0
LRFN1Q9P244 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LRFN1Q9P244 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 FAM220BP-201ENST00000377689 816 ntBASIC15.08■□□□□ 0
LRFN1Q9P244 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.08■□□□□ 0
LRFN1Q9P244 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.08■□□□□ 0
LRFN1Q9P244 AL353705.2-201ENST00000428243 662 ntBASIC15.08■□□□□ 0
LRFN1Q9P244 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.08■□□□□ 0
LRFN1Q9P244 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.08■□□□□ 0
LRFN1Q9P244 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.08■□□□□ 0
LRFN1Q9P244 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.08■□□□□ 0
LRFN1Q9P244 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.08■□□□□ 0
LRFN1Q9P244 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms