Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AC067930.6-201ENST00000623257 4947 ntBASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AC126755.1-201ENST00000525846 6405 ntBASIC14.43□□□□□ -0.1
CDH20Q9HBT6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 SNX33P1-201ENST00000592116 1762 ntBASIC14.43□□□□□ -0.1
CDH20Q9HBT6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 AP002472.1-201ENST00000577490 586 ntBASIC14.43□□□□□ -0.1
CDH20Q9HBT6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 AC091812.2-201ENST00000619081 385 ntBASIC14.43□□□□□ -0.1
CDH20Q9HBT6 C20orf181-201ENST00000623918 480 ntBASIC14.43□□□□□ -0.1
CDH20Q9HBT6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH20Q9HBT6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms