Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 RBM17P3-201ENST00000417687 1192 ntBASIC14.45□□□□□ -0.1
ELL3Q9HB65 AL513523.2-202ENST00000427283 2040 ntBASIC14.45□□□□□ -0.1
ELL3Q9HB65 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 NKAPP1-205ENST00000585790 367 ntBASIC14.45□□□□□ -0.1
ELL3Q9HB65 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 KRT8P49-201ENST00000604166 1432 ntBASIC14.45□□□□□ -0.1
ELL3Q9HB65 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 AL691432.3-201ENST00000621860 400 ntBASIC14.45□□□□□ -0.1
ELL3Q9HB65 TP73-AS1-207ENST00000624167 988 ntBASIC14.45□□□□□ -0.1
ELL3Q9HB65 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ELL3Q9HB65 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ELL3Q9HB65 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 PAUPAR-201ENST00000630360 2965 ntBASIC14.44□□□□□ -0.1
ELL3Q9HB65 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 AC005052.1-201ENST00000625181 2492 ntBASIC14.44□□□□□ -0.1
ELL3Q9HB65 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms