Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 REXO1L8P-201ENST00000604378 1897 ntBASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 AC109635.5-201ENST00000533593 962 ntBASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 AC064836.3-201ENST00000607928 673 ntBASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC40Q9H9A6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 AL365203.3-201ENST00000609742 2057 ntBASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC40Q9H9A6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 RPL13AP23-201ENST00000480739 586 ntBASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 AL009183.1-201ENST00000603760 355 ntBASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 AC005622.1-201ENST00000636801 1703 ntBASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC40Q9H9A6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms