Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 AC008677.1-201ENST00000519230 1561 ntBASIC15.32■□□□□ 0.04
TMEM38AQ9H6F2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 KRT18P67-201ENST00000432816 1264 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AF186996.4-201ENST00000467186 377 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AL031432.2-201ENST00000566714 459 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AL928711.1-201ENST00000570165 459 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AL121912.1-201ENST00000603683 238 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AC012313.10-201ENST00000623509 926 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AC016027.1-202ENST00000607927 1699 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 AC022532.1-201ENST00000624563 1728 ntBASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM38AQ9H6F2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 UNC93B7-201ENST00000509439 705 ntBASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM38AQ9H6F2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms