Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.69■□□□□ 0.42
NXF3Q9H4D5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 AL079307.3-201ENST00000556114 283 ntBASIC17.69■□□□□ 0.42
NXF3Q9H4D5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 LINC02560-201ENST00000596379 459 ntBASIC17.69■□□□□ 0.42
NXF3Q9H4D5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 AC022144.1-201ENST00000602255 1580 ntBASIC17.69■□□□□ 0.42
NXF3Q9H4D5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NXF3Q9H4D5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 COX20P2-201ENST00000452636 358 ntBASIC17.68■□□□□ 0.42
NXF3Q9H4D5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 TERF1P3-201ENST00000505638 1227 ntBASIC17.68■□□□□ 0.42
NXF3Q9H4D5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 AL844908.2-201ENST00000609461 460 ntBASIC17.68■□□□□ 0.42
NXF3Q9H4D5 AC008761.3-201ENST00000624803 892 ntBASIC17.68■□□□□ 0.42
NXF3Q9H4D5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.68■□□□□ 0.42
NXF3Q9H4D5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 FAM207CP-201ENST00000443486 507 ntBASIC17.67■□□□□ 0.42
NXF3Q9H4D5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 SERBP1P5-201ENST00000510079 1181 ntBASIC17.67■□□□□ 0.42
NXF3Q9H4D5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NXF3Q9H4D5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms