Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 AC069335.1-201ENST00000489972 472 ntBASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 AC025678.2-201ENST00000562061 970 ntBASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 AC008267.7-201ENST00000624570 1194 ntBASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 LINC00628-201ENST00000628516 1289 ntBASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 AL139011.1-202ENST00000642063 584 ntBASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 PKD1P5-201ENST00000532415 10291 ntBASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 AC011270.2-201ENST00000624293 2550 ntBASIC13.77□□□□□ -0.21
SSBP3Q9BWW4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AL645939.2-201ENST00000427340 991 ntBASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 HLA-J-203ENST00000494367 1087 ntBASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AC093520.2-201ENST00000561830 333 ntBASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AC027307.2-201ENST00000591252 911 ntBASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AC093028.1-201ENST00000622998 982 ntBASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AL645728.1-201ENST00000366221 2101 ntBASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AC008741.2-201ENST00000612792 3115 ntBASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP3Q9BWW4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC027796.2-201ENST00000575326 344 ntBASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms