Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE1Q99829 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE1Q99829 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE1Q99829 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPNE1Q99829 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE1Q99829 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE1Q99829 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.48■□□□□ 0.23
CPNE1Q99829 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPNE1Q99829 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE1Q99829 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE1Q99829 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE1Q99829 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CPNE1Q99829 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CPNE1Q99829 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
CPNE1Q99829 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.48■□□□□ 0.23
CPNE1Q99829 AC018712.1-201ENST00000455767 687 ntBASIC16.48■□□□□ 0.23
CPNE1Q99829 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE1Q99829 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE1Q99829 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE1Q99829 AL160237.2-201ENST00000556165 472 ntBASIC16.48■□□□□ 0.23
CPNE1Q99829 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE1Q99829 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.48■□□□□ 0.23
CPNE1Q99829 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CPNE1Q99829 AC012313.10-201ENST00000623509 926 ntBASIC16.48■□□□□ 0.23
CPNE1Q99829 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE1Q99829 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE1Q99829 AC069224.1-201ENST00000566372 1715 ntBASIC16.48■□□□□ 0.23
CPNE1Q99829 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.47■□□□□ 0.23
CPNE1Q99829 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE1Q99829 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE1Q99829 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE1Q99829 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.47■□□□□ 0.23
CPNE1Q99829 FAM185BP-201ENST00000443595 716 ntBASIC16.47■□□□□ 0.23
CPNE1Q99829 AC108073.2-201ENST00000464002 357 ntBASIC16.47■□□□□ 0.23
CPNE1Q99829 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CPNE1Q99829 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.47■□□□□ 0.23
CPNE1Q99829 AC021097.1-201ENST00000607902 574 ntBASIC16.47■□□□□ 0.23
CPNE1Q99829 ACTL9-202ENST00000612068 1252 ntBASIC16.47■□□□□ 0.23
CPNE1Q99829 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CPNE1Q99829 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 AP002414.3-201ENST00000589352 1468 ntBASIC16.47■□□□□ 0.23
CPNE1Q99829 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE1Q99829 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.47■□□□□ 0.23
CPNE1Q99829 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE1Q99829 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.46■□□□□ 0.23
CPNE1Q99829 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.46■□□□□ 0.23
CPNE1Q99829 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE1Q99829 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.46■□□□□ 0.23
CPNE1Q99829 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE1Q99829 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE1Q99829 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CPNE1Q99829 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.46■□□□□ 0.23
CPNE1Q99829 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 RPS2P28-201ENST00000314255 741 ntBASIC16.46■□□□□ 0.23
CPNE1Q99829 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CPNE1Q99829 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.46■□□□□ 0.23
CPNE1Q99829 RNU1-129P-201ENST00000384064 167 ntBASIC16.46■□□□□ 0.23
CPNE1Q99829 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms