Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL19Q99731 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL19Q99731 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CCL19Q99731 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL19Q99731 PCDHB17P-201ENST00000539533 2393 ntBASIC13.81□□□□□ -0.2
CCL19Q99731 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL19Q99731 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCL19Q99731 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CCL19Q99731 AC112492.5-201ENST00000421897 457 ntBASIC13.81□□□□□ -0.2
CCL19Q99731 AC234783.1-201ENST00000441761 496 ntBASIC13.81□□□□□ -0.2
CCL19Q99731 AL139010.1-201ENST00000454878 894 ntBASIC13.81□□□□□ -0.2
CCL19Q99731 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.81□□□□□ -0.2
CCL19Q99731 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL19Q99731 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL19Q99731 AL139011.1-202ENST00000642063 584 ntBASIC13.81□□□□□ -0.2
CCL19Q99731 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
CCL19Q99731 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL19Q99731 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCL19Q99731 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL19Q99731 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL19Q99731 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL19Q99731 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL19Q99731 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL19Q99731 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCL19Q99731 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CCL19Q99731 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
CCL19Q99731 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCL19Q99731 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL19Q99731 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.8□□□□□ -0.2
CCL19Q99731 RN7SL837P-201ENST00000463010 287 ntBASIC13.8□□□□□ -0.2
CCL19Q99731 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCL19Q99731 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL19Q99731 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CCL19Q99731 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CCL19Q99731 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.8□□□□□ -0.2
CCL19Q99731 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CCL19Q99731 AC093726.1-201ENST00000608064 963 ntBASIC13.8□□□□□ -0.2
CCL19Q99731 AC099568.2-201ENST00000609194 695 ntBASIC13.8□□□□□ -0.2
CCL19Q99731 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL19Q99731 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCL19Q99731 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL19Q99731 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms