Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 AL691432.1-201ENST00000596308 1422 ntBASIC16.7■□□□□ 0.26
NOTCH4Q99466 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH4Q99466 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NOTCH4Q99466 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 KRT8P37-201ENST00000451609 1420 ntBASIC16.69■□□□□ 0.26
NOTCH4Q99466 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC022210.1-201ENST00000449856 793 ntBASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC015936.2-201ENST00000593177 259 ntBASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AL033527.5-201ENST00000641382 801 ntBASIC16.69■□□□□ 0.26
NOTCH4Q99466 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH4Q99466 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.69■□□□□ 0.26
NOTCH4Q99466 COX11-210ENST00000639671 696 ntBASIC16.69■□□□□ 0.26
NOTCH4Q99466 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
NOTCH4Q99466 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH4Q99466 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms