Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC138028.6-201ENST00000616106 1482 ntBASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 EIF4HP1-201ENST00000453115 687 ntBASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 UPF3AP2-201ENST00000457924 1132 ntBASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.82□□□□□ -0.2
CSMD1Q96PZ7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 HIST2H2BC-201ENST00000498492 580 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 RN7SL555P-201ENST00000584742 339 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 BX284668.4-201ENST00000453917 508 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 EGFEM1P-202ENST00000431685 1563 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 AL607033.1-201ENST00000623900 1599 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 AC026954.1-201ENST00000429771 1293 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 FTH1P14-201ENST00000482930 551 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 AC018735.1-201ENST00000437208 1502 ntBASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSMD1Q96PZ7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC068587.3-201ENST00000526613 355 ntBASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms