Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 KRT8P23-201ENST00000560090 1207 ntBASIC13.67□□□□□ -0.22
GAFA1Q96PS6 LINC01225-203ENST00000563550 1244 ntBASIC13.67□□□□□ -0.22
GAFA1Q96PS6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
GAFA1Q96PS6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AL592424.1-201ENST00000563624 1536 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AC004461.1-201ENST00000412461 403 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AC069335.1-201ENST00000489972 472 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AP000344.2-201ENST00000512987 629 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AP000842.3-202ENST00000569238 1080 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AC134684.3-201ENST00000641758 218 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 AC006449.6-201ENST00000612330 2296 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 MTHFR-217ENST00000641820 1569 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GAFA1Q96PS6 PCDH8P1-201ENST00000428983 2773 ntBASIC13.66□□□□□ -0.22
GAFA1Q96PS6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CYP2T1P-202ENST00000641596 2535 ntBASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 FOXO1B-201ENST00000504678 1527 ntBASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AL589702.1-201ENST00000641229 1509 ntBASIC13.65□□□□□ -0.22
GAFA1Q96PS6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms