Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.18■□□□□ 0.02
HPS1Q92902 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.17■□□□□ 0.02
HPS1Q92902 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 AC023908.3-201ENST00000564211 3047 ntBASIC15.17■□□□□ 0.02
HPS1Q92902 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HPS1Q92902 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
HPS1Q92902 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.17■□□□□ 0.02
HPS1Q92902 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HPS1Q92902 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HPS1Q92902 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.17■□□□□ 0.02
HPS1Q92902 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.17■□□□□ 0.02
HPS1Q92902 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.17■□□□□ 0.02
HPS1Q92902 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.17■□□□□ 0.02
HPS1Q92902 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.17■□□□□ 0.02
HPS1Q92902 AC064862.7-201ENST00000604520 867 ntBASIC15.17■□□□□ 0.02
HPS1Q92902 AC116407.2-201ENST00000613639 860 ntBASIC15.17■□□□□ 0.02
HPS1Q92902 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.17■□□□□ 0.02
HPS1Q92902 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.17■□□□□ 0.02
HPS1Q92902 AC022532.1-201ENST00000624563 1728 ntBASIC15.17■□□□□ 0.02
HPS1Q92902 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.17■□□□□ 0.02
HPS1Q92902 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HPS1Q92902 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.17■□□□□ 0.02
HPS1Q92902 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.16■□□□□ 0.02
HPS1Q92902 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HPS1Q92902 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HPS1Q92902 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HPS1Q92902 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
HPS1Q92902 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.16■□□□□ 0.02
HPS1Q92902 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.16■□□□□ 0.02
HPS1Q92902 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.16■□□□□ 0.02
HPS1Q92902 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.16■□□□□ 0.02
HPS1Q92902 SAPCD2P3-201ENST00000455031 850 ntBASIC15.16■□□□□ 0.02
HPS1Q92902 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.16■□□□□ 0.02
HPS1Q92902 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.16■□□□□ 0.02
HPS1Q92902 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.16■□□□□ 0.02
HPS1Q92902 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HPS1Q92902 AP002469.2-201ENST00000531724 424 ntBASIC15.16■□□□□ 0.02
HPS1Q92902 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.16■□□□□ 0.02
HPS1Q92902 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC15.16■□□□□ 0.02
HPS1Q92902 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HPS1Q92902 AC132872.1-201ENST00000566986 1195 ntBASIC15.16■□□□□ 0.02
HPS1Q92902 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.16■□□□□ 0.02
HPS1Q92902 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC15.16■□□□□ 0.02
HPS1Q92902 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.16■□□□□ 0.02
HPS1Q92902 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HPS1Q92902 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms