Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
HTRA1Q92743 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.33■□□□□ 0.05
HTRA1Q92743 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTRA1Q92743 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTRA1Q92743 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTRA1Q92743 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTRA1Q92743 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTRA1Q92743 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HTRA1Q92743 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.33■□□□□ 0.04
HTRA1Q92743 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.33■□□□□ 0.04
HTRA1Q92743 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.33■□□□□ 0.04
HTRA1Q92743 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.33■□□□□ 0.04
HTRA1Q92743 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.33■□□□□ 0.04
HTRA1Q92743 AC120114.3-201ENST00000611923 658 ntBASIC15.33■□□□□ 0.04
HTRA1Q92743 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.33■□□□□ 0.04
HTRA1Q92743 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 HLA-A-201ENST00000376802 1334 ntBASIC15.33■□□□□ 0.04
HTRA1Q92743 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.33■□□□□ 0.04
HTRA1Q92743 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.33■□□□□ 0.04
HTRA1Q92743 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
HTRA1Q92743 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HTRA1Q92743 AL009178.2-201ENST00000597278 2719 ntBASIC15.33■□□□□ 0.04
HTRA1Q92743 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HTRA1Q92743 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HTRA1Q92743 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HTRA1Q92743 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.33■□□□□ 0.04
HTRA1Q92743 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
HTRA1Q92743 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
HTRA1Q92743 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 AC067930.6-201ENST00000623257 4947 ntBASIC15.33■□□□□ 0.04
HTRA1Q92743 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.33■□□□□ 0.04
HTRA1Q92743 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTRA1Q92743 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 PMPCAP1-201ENST00000508114 1576 ntBASIC15.32■□□□□ 0.04
HTRA1Q92743 AC009336.1-201ENST00000608941 1553 ntBASIC15.32■□□□□ 0.04
HTRA1Q92743 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 AL135999.2-201ENST00000622438 1686 ntBASIC15.32■□□□□ 0.04
HTRA1Q92743 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.32■□□□□ 0.04
HTRA1Q92743 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.32■□□□□ 0.04
HTRA1Q92743 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.32■□□□□ 0.04
HTRA1Q92743 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.32■□□□□ 0.04
HTRA1Q92743 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.32■□□□□ 0.04
HTRA1Q92743 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HTRA1Q92743 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.32■□□□□ 0.04
HTRA1Q92743 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTRA1Q92743 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.31■□□□□ 0.04
HTRA1Q92743 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTRA1Q92743 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTRA1Q92743 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTRA1Q92743 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HTRA1Q92743 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTRA1Q92743 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.31■□□□□ 0.04
HTRA1Q92743 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTRA1Q92743 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.31■□□□□ 0.04
HTRA1Q92743 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.31■□□□□ 0.04
HTRA1Q92743 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HTRA1Q92743 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTRA1Q92743 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HTRA1Q92743 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.31■□□□□ 0.04
HTRA1Q92743 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.31■□□□□ 0.04
HTRA1Q92743 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
HTRA1Q92743 MYCLP1-201ENST00000372451 1075 ntBASIC15.31■□□□□ 0.04
HTRA1Q92743 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.31■□□□□ 0.04
HTRA1Q92743 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.31■□□□□ 0.04
HTRA1Q92743 ABCD1P5-201ENST00000445663 754 ntBASIC15.31■□□□□ 0.04
HTRA1Q92743 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.31■□□□□ 0.04
HTRA1Q92743 FAM197Y8-203ENST00000450145 560 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms