Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.56□□□□□ -0.08
AP3S1Q92572 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.56□□□□□ -0.08
AP3S1Q92572 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.56□□□□□ -0.08
AP3S1Q92572 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AP3S1Q92572 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP3S1Q92572 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP3S1Q92572 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.55□□□□□ -0.08
AP3S1Q92572 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
AP3S1Q92572 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
AP3S1Q92572 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 INGX-201ENST00000359239 846 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.55□□□□□ -0.08
AP3S1Q92572 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 ACTG1P4-201ENST00000425123 1122 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
AP3S1Q92572 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.55□□□□□ -0.08
AP3S1Q92572 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
AP3S1Q92572 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.55□□□□□ -0.08
AP3S1Q92572 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.55□□□□□ -0.08
AP3S1Q92572 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.55□□□□□ -0.08
AP3S1Q92572 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.55□□□□□ -0.08
AP3S1Q92572 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
AP3S1Q92572 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 AC136621.1-201ENST00000624017 2304 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 AC125634.1-201ENST00000438758 1403 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP3S1Q92572 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
AP3S1Q92572 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 CICP13-201ENST00000422015 2789 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.55□□□□□ -0.08
AP3S1Q92572 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
AP3S1Q92572 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
AP3S1Q92572 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP3S1Q92572 PCGF3-213ENST00000620529 1899 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 LINC01101-201ENST00000622953 1884 ntBASIC14.55□□□□□ -0.08
AP3S1Q92572 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
AP3S1Q92572 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
AP3S1Q92572 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S1Q92572 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S1Q92572 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms