Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 RN7SL340P-201ENST00000470792 296 ntBASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 POM121L8P-201ENST00000417732 1281 ntBASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 RN7SL300P-201ENST00000582522 318 ntBASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 AC012044.1-201ENST00000603431 297 ntBASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 SLC9A3P2-201ENST00000447821 2021 ntBASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SYNE2Q8WXH0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A7P-201ENST00000382628 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A23P-201ENST00000400136 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A21P-201ENST00000510875 1396 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A15P-201ENST00000514465 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A6P-201ENST00000515148 1394 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A16P-201ENST00000526662 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A9P-201ENST00000527940 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A5P-201ENST00000528738 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A14P-201ENST00000530386 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FAM90A13P-201ENST00000534703 1395 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC004837.1-201ENST00000446267 564 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC063952.3-201ENST00000467756 308 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 EID1-202ENST00000560490 584 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC020916.1-201ENST00000587762 1774 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 KRT8P30-201ENST00000432100 650 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC022137.2-201ENST00000503482 481 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 INO80E-209ENST00000567254 625 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms