Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 ZNF767P-206ENST00000513792 565 ntBASIC19.74■□□□□ 0.75
SNED1Q8TER0 RNA5SP412-201ENST00000516234 123 ntBASIC19.74■□□□□ 0.75
SNED1Q8TER0 AC124283.3-201ENST00000570869 594 ntBASIC19.74■□□□□ 0.75
SNED1Q8TER0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.74■□□□□ 0.75
SNED1Q8TER0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 AC020907.1-201ENST00000616460 1350 ntBASIC19.73■□□□□ 0.75
SNED1Q8TER0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 AL162726.2-201ENST00000438986 1017 ntBASIC19.73■□□□□ 0.75
SNED1Q8TER0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.73■□□□□ 0.75
SNED1Q8TER0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 SLC25A47P1-201ENST00000531577 414 ntBASIC19.73■□□□□ 0.75
SNED1Q8TER0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.73■□□□□ 0.75
SNED1Q8TER0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.73■□□□□ 0.75
SNED1Q8TER0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNED1Q8TER0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 ACTG1P3-201ENST00000431775 1114 ntBASIC19.72■□□□□ 0.75
SNED1Q8TER0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SNED1Q8TER0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNED1Q8TER0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 FO681548.1-201ENST00000455617 1132 ntBASIC19.71■□□□□ 0.75
SNED1Q8TER0 AC108725.1-201ENST00000495472 409 ntBASIC19.71■□□□□ 0.75
SNED1Q8TER0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SNED1Q8TER0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNED1Q8TER0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms