Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTL9Q8NET4 AC005622.1-201ENST00000636801 1703 ntBASIC20.12■□□□□ 0.81
RTL9Q8NET4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 SPDYE18-201ENST00000510091 1050 ntBASIC20.11■□□□□ 0.81
RTL9Q8NET4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 AC044860.1-202ENST00000559481 777 ntBASIC20.11■□□□□ 0.81
RTL9Q8NET4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.11■□□□□ 0.81
RTL9Q8NET4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RTL9Q8NET4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RTL9Q8NET4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 DFFBP1-201ENST00000433250 979 ntBASIC20.1■□□□□ 0.81
RTL9Q8NET4 POU5F1P6-201ENST00000466990 990 ntBASIC20.1■□□□□ 0.81
RTL9Q8NET4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 MIR6752-201ENST00000618442 71 ntBASIC20.1■□□□□ 0.81
RTL9Q8NET4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.1■□□□□ 0.81
RTL9Q8NET4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL9Q8NET4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 ATP5G2P4-201ENST00000442175 420 ntBASIC20.09■□□□□ 0.81
RTL9Q8NET4 EEF1DP4-201ENST00000446006 880 ntBASIC20.09■□□□□ 0.81
RTL9Q8NET4 KRT17P7-201ENST00000451704 1104 ntBASIC20.09■□□□□ 0.81
RTL9Q8NET4 AC245100.5-201ENST00000452108 331 ntBASIC20.09■□□□□ 0.81
RTL9Q8NET4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 AC007541.1-201ENST00000570282 1469 ntBASIC20.09■□□□□ 0.81
RTL9Q8NET4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RTL9Q8NET4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL9Q8NET4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 AL353779.1-201ENST00000434793 351 ntBASIC20.08■□□□□ 0.81
RTL9Q8NET4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms