Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM1BQ8NB78 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AL139384.1-201ENST00000612143 3047 ntBASIC16.78■□□□□ 0.28
KDM1BQ8NB78 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 HLA-J-202ENST00000469281 1241 ntBASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AC140878.1-201ENST00000565277 250 ntBASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 AC020765.3-201ENST00000613051 740 ntBASIC16.78■□□□□ 0.28
KDM1BQ8NB78 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 CICP6-201ENST00000457191 2729 ntBASIC16.78■□□□□ 0.28
KDM1BQ8NB78 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM1BQ8NB78 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 LINC02199-201ENST00000506655 2702 ntBASIC16.77■□□□□ 0.28
KDM1BQ8NB78 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 AL391005.1-201ENST00000623953 2435 ntBASIC16.77■□□□□ 0.28
KDM1BQ8NB78 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 AC107890.1-201ENST00000422478 521 ntBASIC16.77■□□□□ 0.28
KDM1BQ8NB78 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 RNA5SP421-201ENST00000516864 134 ntBASIC16.77■□□□□ 0.28
KDM1BQ8NB78 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 SPCS2P1-201ENST00000561636 679 ntBASIC16.77■□□□□ 0.28
KDM1BQ8NB78 RARRES2P9-201ENST00000565168 469 ntBASIC16.77■□□□□ 0.28
KDM1BQ8NB78 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 AL096865.1-201ENST00000606796 927 ntBASIC16.77■□□□□ 0.28
KDM1BQ8NB78 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM1BQ8NB78 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM1BQ8NB78 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KDM1BQ8NB78 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM1BQ8NB78 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.77■□□□□ 0.27
KDM1BQ8NB78 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM1BQ8NB78 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms