Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 AC026120.1-201ENST00000611536 926 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 AC008894.3-201ENST00000624324 3103 ntBASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC33Q8N5R6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 LINC00895-201ENST00000629028 1637 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 AL355306.1-201ENST00000415580 579 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 SPDYE11-202ENST00000450699 704 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 SPDYE9P-201ENST00000570642 692 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 AC099522.2-201ENST00000607001 744 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 SPDYE10P-202ENST00000612005 668 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 SPDYE8P-202ENST00000612377 668 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 SNX33P1-201ENST00000592116 1762 ntBASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC33Q8N5R6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 AL627223.1-201ENST00000416693 442 ntBASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 BCRP1-201ENST00000444246 691 ntBASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms