Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 RPSAP43-201ENST00000402237 625 ntBASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 MIR1233-2-201ENST00000408138 82 ntBASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 MIR1233-1-201ENST00000408722 82 ntBASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 IGHV3-62-201ENST00000520057 340 ntBASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 AL135744.1-201ENST00000565098 629 ntBASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 AC079781.4-201ENST00000641908 219 ntBASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 UBALD1-205ENST00000590891 2641 ntBASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAB42Q8N4Z0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AC211486.1-202ENST00000416371 468 ntBASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AC112482.1-201ENST00000492080 688 ntBASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AC211476.1-201ENST00000503899 468 ntBASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 MIR4469-201ENST00000583919 79 ntBASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB42Q8N4Z0 AC009053.2-201ENST00000563701 2365 ntBASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 AC126755.1-201ENST00000525846 6405 ntBASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 YBX1P5-201ENST00000509441 847 ntBASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 PRYP6-201ENST00000514804 343 ntBASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 AC023511.2-201ENST00000618803 211 ntBASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RAB42Q8N4Z0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RAB42Q8N4Z0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
RAB42Q8N4Z0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
RAB42Q8N4Z0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB42Q8N4Z0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB42Q8N4Z0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms