Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 AC084018.2-201ENST00000613093 2607 ntBASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 KRT8P39-201ENST00000396270 1433 ntBASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 AL512384.1-201ENST00000406683 331 ntBASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 MEP1AP4-201ENST00000423244 1087 ntBASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 AC017083.2-201ENST00000608069 979 ntBASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYNPOQ8N3V7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 INE1-201ENST00000456273 945 ntBASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 AC026979.3-201ENST00000607315 403 ntBASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms