Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS8Q8N3P4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
VPS8Q8N3P4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS8Q8N3P4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC25.42■■□□□ 1.66
VPS8Q8N3P4 AP001282.1-201ENST00000531301 1499 ntBASIC25.41■■□□□ 1.66
VPS8Q8N3P4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 SERBP1P3-201ENST00000459980 809 ntBASIC25.41■■□□□ 1.66
VPS8Q8N3P4 SPDYE18-201ENST00000510091 1050 ntBASIC25.41■■□□□ 1.66
VPS8Q8N3P4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS8Q8N3P4 AC092364.2-201ENST00000596710 2692 ntBASIC25.4■■□□□ 1.66
VPS8Q8N3P4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CALY-203ENST00000368558 825 ntTSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 MIR648-201ENST00000385046 94 ntBASIC25.4■■□□□ 1.66
VPS8Q8N3P4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AZGP1P1-201ENST00000411909 902 ntBASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AC002472.2-201ENST00000442739 958 ntBASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AC243562.2-201ENST00000561247 970 ntBASIC25.4■■□□□ 1.66
VPS8Q8N3P4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC25.4■■□□□ 1.66
VPS8Q8N3P4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS8Q8N3P4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS8Q8N3P4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
VPS8Q8N3P4 AC236430.1-201ENST00000402231 743 ntBASIC25.39■■□□□ 1.66
VPS8Q8N3P4 HAUS4P1-201ENST00000406739 1145 ntBASIC25.39■■□□□ 1.66
VPS8Q8N3P4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC25.39■■□□□ 1.66
VPS8Q8N3P4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
VPS8Q8N3P4 INGX-202ENST00000489074 768 ntBASIC25.39■■□□□ 1.66
VPS8Q8N3P4 MIR4745-201ENST00000577608 62 ntBASIC25.39■■□□□ 1.66
VPS8Q8N3P4 RN7SL204P-201ENST00000582831 262 ntBASIC25.39■■□□□ 1.66
VPS8Q8N3P4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC25.39■■□□□ 1.66
VPS8Q8N3P4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 BNIP3P1-202ENST00000550043 1585 ntBASIC25.39■■□□□ 1.65
VPS8Q8N3P4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS8Q8N3P4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 AC025048.3-201ENST00000590609 569 ntBASIC25.38■■□□□ 1.65
VPS8Q8N3P4 AC005702.4-201ENST00000618393 416 ntBASIC25.38■■□□□ 1.65
VPS8Q8N3P4 AL033527.5-202ENST00000641632 1098 ntBASIC25.38■■□□□ 1.65
VPS8Q8N3P4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms