Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 TMEM14DP-201ENST00000422205 345 ntBASIC17.73■□□□□ 0.43
HERC6Q8IVU3 AC234783.1-201ENST00000441761 496 ntBASIC17.73■□□□□ 0.43
HERC6Q8IVU3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 AP005482.1-201ENST00000563722 1273 ntBASIC17.73■□□□□ 0.43
HERC6Q8IVU3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 COX11-210ENST00000639671 696 ntBASIC17.73■□□□□ 0.43
HERC6Q8IVU3 AL033527.5-202ENST00000641632 1098 ntBASIC17.73■□□□□ 0.43
HERC6Q8IVU3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.73■□□□□ 0.43
HERC6Q8IVU3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 KRT223P-202ENST00000449164 1292 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 SDHAP3-202ENST00000515467 728 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC092552.1-201ENST00000547243 906 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC123567.1-201ENST00000548294 1261 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC023310.3-201ENST00000557027 670 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC100756.1-201ENST00000562736 682 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC138749.3-201ENST00000567691 622 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC116165.1-201ENST00000611806 668 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC004461.2-201ENST00000629517 803 ntBASIC17.72■□□□□ 0.43
HERC6Q8IVU3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC6Q8IVU3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 KRT8P12-202ENST00000472924 1397 ntBASIC17.71■□□□□ 0.43
HERC6Q8IVU3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 MIR4525-201ENST00000580000 75 ntBASIC17.71■□□□□ 0.43
HERC6Q8IVU3 AC133552.6-201ENST00000613406 534 ntBASIC17.71■□□□□ 0.43
HERC6Q8IVU3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 REXO1L6P-201ENST00000603433 1515 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms