Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 AL592424.1-201ENST00000563624 1536 ntBASIC17.93■□□□□ 0.46
CNGA4Q8IV77 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 HCG4-201ENST00000418983 998 ntBASIC17.93■□□□□ 0.46
CNGA4Q8IV77 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 AC107918.2-201ENST00000530817 355 ntBASIC17.93■□□□□ 0.46
CNGA4Q8IV77 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 AC005412.3-201ENST00000580309 715 ntBASIC17.93■□□□□ 0.46
CNGA4Q8IV77 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 AC138894.3-201ENST00000603787 634 ntBASIC17.93■□□□□ 0.46
CNGA4Q8IV77 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNGA4Q8IV77 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 AC069148.1-201ENST00000608741 768 ntBASIC17.92■□□□□ 0.46
CNGA4Q8IV77 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 AL805961.1-202ENST00000641562 540 ntBASIC17.92■□□□□ 0.46
CNGA4Q8IV77 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 AC013268.4-201ENST00000637413 2228 ntBASIC17.92■□□□□ 0.46
CNGA4Q8IV77 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.92■□□□□ 0.46
CNGA4Q8IV77 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 AC016027.1-202ENST00000607927 1699 ntBASIC17.91■□□□□ 0.46
CNGA4Q8IV77 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNGA4Q8IV77 ATP5G2P1-201ENST00000433580 426 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms