Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF135Q8IUD6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 AC112492.5-201ENST00000421897 457 ntBASIC17.45■□□□□ 0.38
RNF135Q8IUD6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 AC009477.1-201ENST00000452936 217 ntBASIC17.45■□□□□ 0.38
RNF135Q8IUD6 RN7SL752P-201ENST00000463779 287 ntBASIC17.45■□□□□ 0.38
RNF135Q8IUD6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 AC005412.3-201ENST00000580309 715 ntBASIC17.45■□□□□ 0.38
RNF135Q8IUD6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 AC003101.2-201ENST00000612557 442 ntBASIC17.45■□□□□ 0.38
RNF135Q8IUD6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 AC016396.2-201ENST00000562575 1417 ntBASIC17.45■□□□□ 0.38
RNF135Q8IUD6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF135Q8IUD6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 AP006294.1-201ENST00000415407 339 ntBASIC17.44■□□□□ 0.38
RNF135Q8IUD6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 KRT17P8-201ENST00000540749 863 ntBASIC17.44■□□□□ 0.38
RNF135Q8IUD6 RAB43P1-201ENST00000561790 589 ntBASIC17.44■□□□□ 0.38
RNF135Q8IUD6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 AC104794.3-201ENST00000566840 1248 ntBASIC17.44■□□□□ 0.38
RNF135Q8IUD6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 AC116353.5-201ENST00000638148 1699 ntBASIC17.44■□□□□ 0.38
RNF135Q8IUD6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF135Q8IUD6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF135Q8IUD6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms