Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 AC073347.1-201ENST00000421633 2643 ntBASIC14.73□□□□□ -0.05
LRRC28Q86X40 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRC28Q86X40 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRC28Q86X40 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 AL353593.2-201ENST00000602529 1483 ntBASIC14.72□□□□□ -0.05
LRRC28Q86X40 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 MRPL3P1-201ENST00000400109 1033 ntBASIC14.72□□□□□ -0.05
LRRC28Q86X40 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 AC073648.2-201ENST00000510116 352 ntBASIC14.72□□□□□ -0.05
LRRC28Q86X40 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 LINC00895-201ENST00000629028 1637 ntBASIC14.72□□□□□ -0.05
LRRC28Q86X40 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRC28Q86X40 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRC28Q86X40 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.71□□□□□ -0.05
LRRC28Q86X40 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 AC079776.2-201ENST00000641154 1609 ntBASIC14.71□□□□□ -0.05
LRRC28Q86X40 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 SART3-203ENST00000546611 1184 ntBASIC14.71□□□□□ -0.05
LRRC28Q86X40 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.71□□□□□ -0.05
LRRC28Q86X40 NKAPP1-205ENST00000585790 367 ntBASIC14.71□□□□□ -0.05
LRRC28Q86X40 AL773604.1-201ENST00000617417 272 ntBASIC14.71□□□□□ -0.05
LRRC28Q86X40 AC073592.5-201ENST00000624854 528 ntBASIC14.71□□□□□ -0.05
LRRC28Q86X40 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRC28Q86X40 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms