Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 AL139011.1-202ENST00000642063 584 ntBASIC13.75□□□□□ -0.21
ZNF546Q86UE3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 LINC00528-201ENST00000600723 2160 ntBASIC13.75□□□□□ -0.21
ZNF546Q86UE3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 LINC01101-201ENST00000622953 1884 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 AL021920.2-201ENST00000624828 1351 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 AC097374.2-201ENST00000618617 1306 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 HMGA1P5-201ENST00000412453 271 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 AC020658.6-201ENST00000623564 1870 ntBASIC13.74□□□□□ -0.21
ZNF546Q86UE3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF546Q86UE3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.73□□□□□ -0.21
ZNF546Q86UE3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 AC026396.1-201ENST00000419388 421 ntBASIC13.73□□□□□ -0.21
ZNF546Q86UE3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF546Q86UE3 TSPY20P-201ENST00000450910 630 ntBASIC13.73□□□□□ -0.21
ZNF546Q86UE3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms