Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
LCA10Q71F78 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 AC116562.2-201ENST00000507042 360 ntBASIC8.95□□□□□ -0.98
LCA10Q71F78 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC8.95□□□□□ -0.98
LCA10Q71F78 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC8.95□□□□□ -0.98
LCA10Q71F78 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC8.95□□□□□ -0.98
LCA10Q71F78 GRAMD4P8-201ENST00000605465 1115 ntBASIC8.95□□□□□ -0.98
LCA10Q71F78 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 DECR2-212ENST00000627716 352 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 MIR193BHG-211ENST00000641433 5365 ntBASIC8.95□□□□□ -0.98
LCA10Q71F78 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC8.95□□□□□ -0.98
LCA10Q71F78 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 KRT8P7-201ENST00000533003 1432 ntBASIC8.95□□□□□ -0.98
LCA10Q71F78 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 USP47-202ENST00000339865 7775 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC8.95□□□□□ -0.98
LCA10Q71F78 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LCA10Q71F78 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LCA10Q71F78 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC8.95□□□□□ -0.98
LCA10Q71F78 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 CES1P1-201ENST00000421606 1704 ntBASIC8.94□□□□□ -0.98
LCA10Q71F78 PCDHA3-202ENST00000532566 4594 ntBASIC8.94□□□□□ -0.98
LCA10Q71F78 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
LCA10Q71F78 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
LCA10Q71F78 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 KIRREL3-AS3-201ENST00000404882 831 ntBASIC8.94□□□□□ -0.98
LCA10Q71F78 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 GRAP-204ENST00000573099 846 ntTSL 3 BASIC8.94□□□□□ -0.98
LCA10Q71F78 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms