Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
NIPAL3Q6P499 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.04■□□□□ -0
NIPAL3Q6P499 CRYGEP-201ENST00000412192 528 ntBASIC15.04■□□□□ -0
NIPAL3Q6P499 RPL13AP23-201ENST00000480739 586 ntBASIC15.04■□□□□ -0
NIPAL3Q6P499 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.04■□□□□ -0
NIPAL3Q6P499 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.04■□□□□ -0
NIPAL3Q6P499 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NIPAL3Q6P499 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.04■□□□□ -0
NIPAL3Q6P499 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.04■□□□□ -0
NIPAL3Q6P499 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
NIPAL3Q6P499 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.04■□□□□ -0
NIPAL3Q6P499 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.04■□□□□ -0
NIPAL3Q6P499 AC010654.1-201ENST00000615722 808 ntBASIC15.04■□□□□ -0
NIPAL3Q6P499 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.04■□□□□ -0
NIPAL3Q6P499 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NIPAL3Q6P499 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
NIPAL3Q6P499 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.04■□□□□ -0
NIPAL3Q6P499 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NIPAL3Q6P499 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 TOP3BP1-201ENST00000420768 1380 ntBASIC15.03■□□□□ -0
NIPAL3Q6P499 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NIPAL3Q6P499 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.03■□□□□ -0
NIPAL3Q6P499 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.03■□□□□ -0
NIPAL3Q6P499 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.03■□□□□ -0
NIPAL3Q6P499 AL603832.2-201ENST00000566195 2125 ntBASIC15.03■□□□□ -0
NIPAL3Q6P499 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.03■□□□□ -0
NIPAL3Q6P499 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 GGT4P-201ENST00000623672 1708 ntBASIC15.03■□□□□ -0
NIPAL3Q6P499 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NIPAL3Q6P499 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NIPAL3Q6P499 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
NIPAL3Q6P499 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.03■□□□□ -0
NIPAL3Q6P499 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.02■□□□□ -0
NIPAL3Q6P499 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.02■□□□□ -0
NIPAL3Q6P499 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NIPAL3Q6P499 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.02■□□□□ -0
NIPAL3Q6P499 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NIPAL3Q6P499 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 AC129492.6-201ENST00000611383 1305 ntBASIC15.02■□□□□ -0
NIPAL3Q6P499 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.02■□□□□ -0
NIPAL3Q6P499 PRSS29P-201ENST00000440800 595 ntBASIC15.02■□□□□ -0
NIPAL3Q6P499 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NIPAL3Q6P499 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.02■□□□□ -0
NIPAL3Q6P499 BX640515.1-201ENST00000617215 977 ntBASIC15.02■□□□□ -0
NIPAL3Q6P499 REXO1L3P-201ENST00000622202 1288 ntBASIC15.02■□□□□ -0
NIPAL3Q6P499 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.02■□□□□ -0
NIPAL3Q6P499 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
NIPAL3Q6P499 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NIPAL3Q6P499 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms