Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 MIR648-201ENST00000385046 94 ntBASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 TSSC2-201ENST00000450217 709 ntBASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 PAWRP1-201ENST00000451083 565 ntBASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 DUX4L26-201ENST00000489078 1255 ntBASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 PPT1-215ENST00000641471 2368 ntBASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AC099063.4-201ENST00000641099 1602 ntBASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AC064862.7-201ENST00000604520 867 ntBASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 REXO1L3P-201ENST00000622202 1288 ntBASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AL121956.5-201ENST00000625261 221 ntBASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms