Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.71■□□□□ 0.27
KHDC1Q4VXA5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KHDC1Q4VXA5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.71■□□□□ 0.26
KHDC1Q4VXA5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 BCAR1-209ENST00000546196 1340 ntBASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 AC025580.3-201ENST00000617932 1424 ntBASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 AL021920.2-201ENST00000624828 1351 ntBASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 AL513480.1-201ENST00000451731 511 ntBASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 KRT19P2-202ENST00000557173 1012 ntBASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KHDC1Q4VXA5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 MPDU1-223ENST00000582151 728 ntBASIC16.69■□□□□ 0.26
KHDC1Q4VXA5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms