Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 MIR6069-201ENST00000620069 79 ntBASIC19.56■□□□□ 0.72
PDS5AQ29RF7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 UBALD1-205ENST00000590891 2641 ntBASIC19.56■□□□□ 0.72
PDS5AQ29RF7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDS5AQ29RF7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 PCDHA12-202ENST00000613593 2588 ntBASIC19.55■□□□□ 0.72
PDS5AQ29RF7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 SDHAP3-202ENST00000515467 728 ntBASIC19.55■□□□□ 0.72
PDS5AQ29RF7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 AC135586.1-201ENST00000539323 574 ntBASIC19.55■□□□□ 0.72
PDS5AQ29RF7 AC044860.1-202ENST00000559481 777 ntBASIC19.55■□□□□ 0.72
PDS5AQ29RF7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PDS5AQ29RF7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 AC004987.2-201ENST00000395959 1148 ntBASIC19.54■□□□□ 0.72
PDS5AQ29RF7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.54■□□□□ 0.72
PDS5AQ29RF7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 AC022211.2-201ENST00000585075 2527 ntBASIC19.54■□□□□ 0.72
PDS5AQ29RF7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 AC012313.1-201ENST00000593393 3059 ntBASIC19.54■□□□□ 0.72
PDS5AQ29RF7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 AL691432.1-201ENST00000596308 1422 ntBASIC19.54■□□□□ 0.72
PDS5AQ29RF7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.54■□□□□ 0.72
PDS5AQ29RF7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms