Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PPP3CAQ08209 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.74■□□□□ 0.43
PPP3CAQ08209 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 ELL2P1-201ENST00000413990 1906 ntBASIC17.73■□□□□ 0.43
PPP3CAQ08209 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC112482.1-201ENST00000492080 688 ntBASIC17.73■□□□□ 0.43
PPP3CAQ08209 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 LINC01225-203ENST00000563550 1244 ntBASIC17.73■□□□□ 0.43
PPP3CAQ08209 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC005829.1-201ENST00000570002 483 ntBASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC010327.4-202ENST00000591484 748 ntBASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC073389.1-201ENST00000595595 795 ntBASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 AC026120.1-201ENST00000611536 926 ntBASIC17.73■□□□□ 0.43
PPP3CAQ08209 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.73■□□□□ 0.43
PPP3CAQ08209 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PPP3CAQ08209 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 AL589702.1-201ENST00000641229 1509 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PPP3CAQ08209 RPSAP43-201ENST00000402237 625 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 BX842568.4-201ENST00000421222 227 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 GPX1P2-201ENST00000429271 606 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 SPCS2P4-201ENST00000436160 681 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 ACTG1P14-201ENST00000446382 1122 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 AC079140.1-201ENST00000508039 487 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 FAM86C2P-203ENST00000528684 1004 ntBASIC17.72■□□□□ 0.43
PPP3CAQ08209 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.72■□□□□ 0.43
PPP3CAQ08209 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms