Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST1H1AQ02539 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 AC243591.1-201ENST00000452967 1364 ntBASIC12.69□□□□□ -0.38
HIST1H1AQ02539 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 RBM17P3-201ENST00000417687 1192 ntBASIC12.69□□□□□ -0.38
HIST1H1AQ02539 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 PRELID1P1-202ENST00000567272 903 ntBASIC12.69□□□□□ -0.38
HIST1H1AQ02539 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 MTDHP3-201ENST00000594186 672 ntBASIC12.69□□□□□ -0.38
HIST1H1AQ02539 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST1H1AQ02539 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 AL645728.1-201ENST00000366221 2101 ntBASIC12.68□□□□□ -0.38
HIST1H1AQ02539 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 AC106795.1-205ENST00000512851 1056 ntBASIC12.68□□□□□ -0.38
HIST1H1AQ02539 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 NKAPP1-205ENST00000585790 367 ntBASIC12.68□□□□□ -0.38
HIST1H1AQ02539 LINC01711-201ENST00000598340 967 ntBASIC12.68□□□□□ -0.38
HIST1H1AQ02539 AL353135.1-201ENST00000606729 504 ntBASIC12.68□□□□□ -0.38
HIST1H1AQ02539 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HIST1H1AQ02539 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms