Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.25■□□□□ 0.19
CDKL1Q00532 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL1Q00532 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.25■□□□□ 0.19
CDKL1Q00532 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.25■□□□□ 0.19
CDKL1Q00532 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL1Q00532 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKL1Q00532 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.24■□□□□ 0.19
CDKL1Q00532 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CDKL1Q00532 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 HCG4B-203ENST00000450128 991 ntBASIC16.24■□□□□ 0.19
CDKL1Q00532 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.24■□□□□ 0.19
CDKL1Q00532 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDKL1Q00532 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 MTHFR-217ENST00000641820 1569 ntBASIC16.24■□□□□ 0.19
CDKL1Q00532 LINC01144-201ENST00000626198 1710 ntBASIC16.24■□□□□ 0.19
CDKL1Q00532 LINC02228-204ENST00000642115 2962 ntBASIC16.24■□□□□ 0.19
CDKL1Q00532 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDKL1Q00532 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKL1Q00532 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.23■□□□□ 0.19
CDKL1Q00532 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKL1Q00532 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 IGLL3P-201ENST00000412472 434 ntBASIC16.23■□□□□ 0.19
CDKL1Q00532 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CDKL1Q00532 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.23■□□□□ 0.19
CDKL1Q00532 AC096734.2-201ENST00000562054 433 ntBASIC16.23■□□□□ 0.19
CDKL1Q00532 AC145285.3-201ENST00000564603 959 ntBASIC16.23■□□□□ 0.19
CDKL1Q00532 AL031432.2-201ENST00000566714 459 ntBASIC16.23■□□□□ 0.19
CDKL1Q00532 AL928711.1-201ENST00000570165 459 ntBASIC16.23■□□□□ 0.19
CDKL1Q00532 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.23■□□□□ 0.19
CDKL1Q00532 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKL1Q00532 AC020765.3-201ENST00000613051 740 ntBASIC16.23■□□□□ 0.19
CDKL1Q00532 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDKL1Q00532 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL1Q00532 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL1Q00532 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CDKL1Q00532 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.22■□□□□ 0.19
CDKL1Q00532 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.22■□□□□ 0.19
CDKL1Q00532 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.22■□□□□ 0.19
CDKL1Q00532 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL1Q00532 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 RNU1-129P-201ENST00000384064 167 ntBASIC16.22■□□□□ 0.19
CDKL1Q00532 HMGA1P7-201ENST00000406908 502 ntBASIC16.22■□□□□ 0.19
CDKL1Q00532 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.22■□□□□ 0.19
CDKL1Q00532 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 RHOQP3-201ENST00000437982 621 ntBASIC16.22■□□□□ 0.19
CDKL1Q00532 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDKL1Q00532 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms