Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
HSPG2P98160 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC9.96□□□□□ -0.81
HSPG2P98160 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
HSPG2P98160 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC9.96□□□□□ -0.82
HSPG2P98160 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC9.96□□□□□ -0.82
HSPG2P98160 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC9.96□□□□□ -0.82
HSPG2P98160 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 BRF1-202ENST00000379932 884 ntTSL 5 BASIC9.96□□□□□ -0.82
HSPG2P98160 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC9.96□□□□□ -0.82
HSPG2P98160 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC9.96□□□□□ -0.82
HSPG2P98160 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC9.96□□□□□ -0.82
HSPG2P98160 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
HSPG2P98160 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC9.96□□□□□ -0.82
HSPG2P98160 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC9.96□□□□□ -0.82
HSPG2P98160 AL139011.1-202ENST00000642063 584 ntBASIC9.96□□□□□ -0.82
HSPG2P98160 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC9.96□□□□□ -0.82
HSPG2P98160 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
HSPG2P98160 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
HSPG2P98160 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
HSPG2P98160 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
HSPG2P98160 DPM2-202ENST00000373110 738 ntTSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC9.95□□□□□ -0.82
HSPG2P98160 SERPINA13P-202ENST00000478994 924 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC9.95□□□□□ -0.82
HSPG2P98160 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC9.95□□□□□ -0.82
HSPG2P98160 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
HSPG2P98160 AC098818.2-201ENST00000564925 2320 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 AL031731.1-201ENST00000642131 2094 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC9.95□□□□□ -0.82
HSPG2P98160 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 MSRA-203ENST00000441698 788 ntTSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 RN7SL818P-201ENST00000485099 259 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 AC026410.3-201ENST00000514280 936 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 RN7SL725P-201ENST00000606439 259 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 AL136301.1-201ENST00000615830 422 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC9.95□□□□□ -0.82
HSPG2P98160 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC9.95□□□□□ -0.82
HSPG2P98160 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC9.95□□□□□ -0.82
HSPG2P98160 ECM1P1-201ENST00000604092 1279 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 AC025181.2-201ENST00000606994 802 ntBASIC9.95□□□□□ -0.82
HSPG2P98160 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
HSPG2P98160 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
HSPG2P98160 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC9.94□□□□□ -0.82
HSPG2P98160 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
HSPG2P98160 SERF2-206ENST00000409291 807 ntTSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC9.94□□□□□ -0.82
HSPG2P98160 CEP164P1-201ENST00000455142 418 ntBASIC9.94□□□□□ -0.82
HSPG2P98160 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC9.94□□□□□ -0.82
HSPG2P98160 AC126915.1-201ENST00000522847 1038 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms