Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 AL591424.1-201ENST00000442569 1213 ntBASIC14.4□□□□□ -0.1
HIST1H3AP68431 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 SLC25A1P1-201ENST00000528351 927 ntBASIC14.4□□□□□ -0.1
HIST1H3AP68431 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 PDPK2P-202ENST00000562415 1191 ntBASIC14.4□□□□□ -0.1
HIST1H3AP68431 AL078644.1-201ENST00000609881 752 ntBASIC14.4□□□□□ -0.1
HIST1H3AP68431 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST1H3AP68431 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HIST1H3AP68431 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HIST1H3AP68431 AL162727.3-201ENST00000635661 2787 ntBASIC14.39□□□□□ -0.11
HIST1H3AP68431 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 AC026396.1-201ENST00000419388 421 ntBASIC14.39□□□□□ -0.11
HIST1H3AP68431 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 AC093724.1-201ENST00000448659 1027 ntBASIC14.39□□□□□ -0.11
HIST1H3AP68431 AC074386.1-202ENST00000463561 864 ntBASIC14.39□□□□□ -0.11
HIST1H3AP68431 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.39□□□□□ -0.11
HIST1H3AP68431 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 FAM197Y3-203ENST00000618346 717 ntBASIC14.39□□□□□ -0.11
HIST1H3AP68431 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H3AP68431 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST1H3AP68431 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H3AP68431 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H3AP68431 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms