Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 AC068418.2-201ENST00000577309 3703 ntBASIC14.52□□□□□ -0.09
RAB1AP62820 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RAB1AP62820 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB1AP62820 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB1AP62820 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.52□□□□□ -0.09
RAB1AP62820 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB1AP62820 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 AL031731.1-201ENST00000642131 2094 ntBASIC14.51□□□□□ -0.09
RAB1AP62820 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB1AP62820 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
RAB1AP62820 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB1AP62820 FAM58CP-201ENST00000435741 640 ntBASIC14.51□□□□□ -0.09
RAB1AP62820 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB1AP62820 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.51□□□□□ -0.09
RAB1AP62820 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAB1AP62820 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB1AP62820 AC092865.5-201ENST00000545435 363 ntBASIC14.51□□□□□ -0.09
RAB1AP62820 MIR3687-2-201ENST00000577708 61 ntBASIC14.51□□□□□ -0.09
RAB1AP62820 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 MIR3687-1-201ENST00000614492 61 ntBASIC14.51□□□□□ -0.09
RAB1AP62820 AC091812.2-201ENST00000619081 385 ntBASIC14.51□□□□□ -0.09
RAB1AP62820 C20orf181-201ENST00000623918 480 ntBASIC14.51□□□□□ -0.09
RAB1AP62820 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
RAB1AP62820 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB1AP62820 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB1AP62820 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB1AP62820 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAB1AP62820 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB1AP62820 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB1AP62820 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB1AP62820 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB1AP62820 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.5□□□□□ -0.09
RAB1AP62820 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB1AP62820 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RAB1AP62820 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB1AP62820 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB1AP62820 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB1AP62820 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB1AP62820 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB1AP62820 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
RAB1AP62820 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.5□□□□□ -0.09
RAB1AP62820 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB1AP62820 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB1AP62820 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB1AP62820 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB1AP62820 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB1AP62820 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB1AP62820 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB1AP62820 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms